CDS
| Accession Number | TCMCG066C10058 |
| gbkey | CDS |
| Protein Id | XP_034586965.1 |
| Location | join(2611729..2611810,2611895..2611980,2612432..2612509,2612618..2612749,2613112..2613162,2613260..2613400,2613487..2613609,2613709..2613786,2614567..2614656,2614731..2614850,2614991..2615074,2615323..2615421,2615506..2615694,2616922..2616997,2617613..2617716,2617847..2618103,2618861..2618947,2619023..2619250,2619471..2619549,2619632..2619695,2619837..2619946) |
| Gene | LOC117849505 |
| GeneID | 117849505 |
| Organism | Setaria viridis |
Protein
| Length | 785aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034731074.1 |
| Definition | pre-rRNA-processing protein TSR1 homolog [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | AARP2CN (NUC121) domain |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGCGGGGGCCGCGCGCAGGTAAACAAGGCTCACAAGACCCGTTTCGCGTCCAAGGCGTCCCGCCACGCGCACAAGATCGATAAGGTCAGGAGCGGGAAGCCAGAGAGCAGCCACCGCGCCGCCGTCAAGGGTGCCCGCGCCGCGCGCATCCAACAGAGCAAGGCGATCCGTGATAAAAAACGTGCTGCTTTGCTGAAGGAGAAACGGTCATCTGTAGGATCTTCAGGCGCACCACGCGTCATTGTTCTTGTTGGATTATCTTCATCAACAGATGTTGGATCACTTGCCAAAGACCTTTTGACATTTGCAGAAGGAGATGATGGGAAACTGAGATCCTCTACTGTTGCTTCTCCTACTTATAAGCTTCGAACCACAGTACTGCAAGCGCCATATGGTGATCTTACCTCATGCATGGAACTTGCAAAGGTTGCTGATTTGTTGGCGTTCGTTCTACCAGCAAATTCATTGTACAGTAGTGATTCGAGCAGTCCAATTGATGAGTTTGGGTCGCAATGCCTATCGGTATTTCGGGCCATGGGCTTACCTAGTACAGCTGTTTTCATTCGAGATCTTCCAGCGGACAATAGAAGTAGGCAAGAATTGAAGAAAGCAGCAACTTCTTTCCTTTCTGCAGAGCTGCCTGAGGACTGCAAGTTTTACTTAGCAGACACAAAGGATGATCTGCATAAGTTCATGTGGCTTTTCAAGGAGCAGCATCTTTCATCACCACATTGGAGAAACCAGAGACCATATGTTATGTCTGAGCAGATCTGCATAAAACCTGATGACAATACGGGATTGTGCACACTTCTTGTGTCTGGGTATTTACGGGCCCATAATCTTTCAGTGAACCAGCTTGTCCATGTTTCAGGTGCTGGTGATTTTCAGTTAGGCCAAATTGATGTCCTCAAGGATCCATGTCCTCTTTGTGAGCGGAAAAGCTCTGATGTTATGGAAACAGAAGATGATGGAATTCAGATTGTTAACACCTTTGTTTCAGACCCTTCGAATCAGGAACCCTTACTTGTTGAAAATGTACCAGATCCTCTTGCTGGGGAGCAGACTTGGCCAACGGAAGAAGATATGAAAGAGGCCAACATAAACAACAAAGAGAGAAAATTGGTAAAGAGGAAGCTTCCCCGAGGCACTTCAGAATACCAGGCTGCTTGGATTGTTGATGATACAGATGATGAAGATAATGACTCCGATAATGACAACCAGGCTGGTTCTGGAATGGTCATCGATGAGCAAGGTCATGCAGATGAAGGAAGTGATGGTTCGGATATAGATGCAGTGTCTCACTTCACGGAAAAGTTTGATACAGAAACAGTTGGGGATACTGAGATGGCAGATGACGAAAATTTGACTAAAGAACAGATAGAAGCTGAGATTAAGAAAATCAAAGAAGCTAATACTGAAGATGAAGAATTTCCTGATGAGGTGGAGACGCCATTGGATGTTCCAGCAAAAAAACGGTTTGCAAAATACAGAGGACTAAAGTCATTTAGGACGTCAGCCTGGGATCCTAAGGAATCATTGCCACCTGATTATGCAAGAATATTTGCATTTGATAACTTCACACGGACTCAAAAGCATGTCCTTGCAAAAATTGCCGAGCTAGATGGGGGAACAAAGGATTGTGCTCTTGTGGGATCGTATGTAAGGCTCTATGTGACAAACGTTCCTACTGATATTGCCTCCAAACTTTGTCATCCATCAAGAAGAATACCTGTGGTGGTTTCTGGTCTTCTTCAACATGAGTCGAAAATGTCAGTTCTTCACTTCAGCATAAAGAAACATGACTCATATGAAGCTCCTATCAAATCTAAGGAGCCGTTGATTTTCAATGTTGGATTCCGGCAATTCACAGCAAGGCCATTGTTTTCATCCGATAACATCAACTGCAATAAACATAAGATGGAGAGATTTCTACATCATGGACGGTTTTCTGTTGCCTCTGTATATGCTCCGATTTGCTTCCCTCCACTTCCTCTAATTGTTTTGAAGAACAGAGATGGTGAGCAGCCTGCCATTGCTGCTGTAGGTTCACTAAAAAGTGTGGATCCAGATCGAATCATACTGAAGAAAATTGTTTTGACGGGGTATCCACAGAGAGTCTCAAAACTGAAAGCGATTGTGCGGTACATGTTCCACAATCCTGAAGATGTCAAATGGTTCAAGCCCGTTGAGTTGTGGACAAAACATGGACGCCGTGGCCGGATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAGTGCATATTCAACAGCAGTATACAGCAGCATGATACCGTGTGCATGAGCTTGTTTAAACGCGCATACCCAAAGTGGCCTGAACAGCTGTACCATGTGTGA |
| Protein: MGGGRAQVNKAHKTRFASKASRHAHKIDKVRSGKPESSHRAAVKGARAARIQQSKAIRDKKRAALLKEKRSSVGSSGAPRVIVLVGLSSSTDVGSLAKDLLTFAEGDDGKLRSSTVASPTYKLRTTVLQAPYGDLTSCMELAKVADLLAFVLPANSLYSSDSSSPIDEFGSQCLSVFRAMGLPSTAVFIRDLPADNRSRQELKKAATSFLSAELPEDCKFYLADTKDDLHKFMWLFKEQHLSSPHWRNQRPYVMSEQICIKPDDNTGLCTLLVSGYLRAHNLSVNQLVHVSGAGDFQLGQIDVLKDPCPLCERKSSDVMETEDDGIQIVNTFVSDPSNQEPLLVENVPDPLAGEQTWPTEEDMKEANINNKERKLVKRKLPRGTSEYQAAWIVDDTDDEDNDSDNDNQAGSGMVIDEQGHADEGSDGSDIDAVSHFTEKFDTETVGDTEMADDENLTKEQIEAEIKKIKEANTEDEEFPDEVETPLDVPAKKRFAKYRGLKSFRTSAWDPKESLPPDYARIFAFDNFTRTQKHVLAKIAELDGGTKDCALVGSYVRLYVTNVPTDIASKLCHPSRRIPVVVSGLLQHESKMSVLHFSIKKHDSYEAPIKSKEPLIFNVGFRQFTARPLFSSDNINCNKHKMERFLHHGRFSVASVYAPICFPPLPLIVLKNRDGEQPAIAAVGSLKSVDPDRIILKKIVLTGYPQRVSKLKAIVRYMFHNPEDVKWFKPVELWTKHGRRGRIKETVGTHGAMKCIFNSSIQQHDTVCMSLFKRAYPKWPEQLYHV |